ENSDARG00000075192


Danio rerio

Features
Gene ID: ENSDARG00000075192
  
Biological name :yme1l1a
  
Synonyms : yme1l1a / YME1-like 1a
  
Possible biological names infered from orthology : O88967 / Q96TA2 / YME1L1 / YME1 like 1 ATPase / YME1-like 1 (S. cerevisiae)
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 32525146
Gene end: 32548602
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104415
Ensembl peptide - ENSDARP00000121005
NCBI entrez gene - 793098     See in Manteia.
swissprot - E7EZJ5
swissprot - E9QCT7
ZFIN ID - ZDB-GENE-091113-41
Ensembl - ENSDARG00000075192
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 YME1L1ENSGALG00000007492Gallus gallus
 Q96TA2ENSG00000136758Homo sapiens
 O88967ENSMUSG00000026775Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
yme1l1b / YME1-like 1b / Q96TA2* / YME1L1* / YME1 like 1 ATPase*ENSDARG0000010440173


Protein motifs (from Interpro)
Interpro ID Name
 IPR000642  Peptidase M41
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR005936  Peptidase, FtsH
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006515 protein quality control for misfolded or incompletely synthesized proteins IBA
 biological_processGO:0007005 mitochondrion organization IBA
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004176 ATP-dependent peptidase activity IBA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008237 metallopeptidase activity IBA


Pathways (from Reactome)
Pathway description
Processing of SMDT1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr