ENSDARG00000075362


Danio rerio

Features
Gene ID: ENSDARG00000075362
  
Biological name :whrna
  
Synonyms : whirlin a / whrna
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 13979033
Gene end: 14175838
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102025
Ensembl peptide - ENSDARP00000114772
NCBI entrez gene - 100334777     See in Manteia.
swissprot - E7F2D8
swissprot - E9QEA2
ZFIN ID - ZDB-GENE-091118-27
Ensembl - ENSDARG00000075362
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
whrnb / whirlin b / WHRN* / Q80VW5* / Q9P202* / whirlin*ENSDARG0000006816658
pdzd7a / PDZ domain containing 7a / PDZD7* / Q9H5P4* / PDZ domain containing 7*ENSDARG0000007697419
ush1c / Usher syndrome 1C / Q9Y6N9* / USH1 protein network component harmonin*ENSDARG0000005187616
pdzd11 / Q6NXB2 / PDZ domain containing 11 / Q9CZG9* / Q5EBL8* / PDZ domain-containing protein 11 *ENSDARG000000531944


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR033028  Whirlin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0050953 sensory perception of light stimulus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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