ENSDARG00000068166


Danio rerio

Features
Gene ID: ENSDARG00000068166
  
Biological name :whrnb
  
Synonyms : whirlin b / whrnb
  
Possible biological names infered from orthology : Q80VW5 / Q9P202 / whirlin / WHRN
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 28999474
Gene end: 29122834
  
Corresponding Affymetrix probe sets: Dr.14095.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000119523
Ensembl peptide - ENSDARP00000130359
Ensembl peptide - ENSDARP00000081631
NCBI entrez gene - 100534775     See in Manteia.
swissprot - A0A0R4I9P6
swissprot - F1R0L2
swissprot - F1R807
ZFIN ID - ZDB-GENE-060526-377
Ensembl - ENSDARG00000068166
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WHRNENSGALG00000038223Gallus gallus
 WHRNENSG00000095397Homo sapiens
 WhrnENSMUSG00000039137Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
whrna / whirlin aENSDARG0000007536258
pdzd7a / PDZ domain containing 7a / PDZD7* / Q9H5P4* / PDZ domain containing 7*ENSDARG0000007697418
ush1c / Usher syndrome 1C / Q9Y6N9* / USH1 protein network component harmonin*ENSDARG0000005187614
pdzd11 / Q6NXB2 / PDZ domain containing 11 / Q9CZG9* / Q5EBL8* / PDZ domain-containing protein 11 *ENSDARG000000531945


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR033028  Whirlin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0050953 sensory perception of light stimulus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr