ENSDARG00000075542


Danio rerio

Features
Gene ID: ENSDARG00000075542
  
Biological name :zfhx4
  
Synonyms : zfhx4 / zinc finger homeobox 4
  
Possible biological names infered from orthology : Q86UP3 / zinc finger homeodomain 4
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 23241444
Gene end: 23323526
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143509
Ensembl peptide - ENSDARP00000101036
Ensembl peptide - ENSDARP00000122306
NCBI entrez gene - 556453     See in Manteia.
RefSeq - XM_005162746
RefSeq - XM_005162749
RefSeq - XM_679268
RefSeq - XM_005162747
swissprot - E7FCF7
ZFIN ID - ZDB-GENE-070530-3
Ensembl - ENSDARG00000075542
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZFHX4ENSGALG00000037164Gallus gallus
 ZFHX4ENSG00000091656Homo sapiens
 Zfhx4ENSMUSG00000025255Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zfhx3 / zinc finger homeobox 3 / Q15911*ENSDARG0000010305751
si:ch73-386h18.1ENSDARG0000007394438


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR009057  Homeobox-like domain superfamily
 IPR013087  Zinc finger C2H2-type
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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