ENSDARG00000075759


Danio rerio

Features
Gene ID: ENSDARG00000075759
  
Biological name :samd4a
  
Synonyms : samd4a / sterile alpha motif domain containing 4A
  
Possible biological names infered from orthology : 1 / Q8CBY1 / Q9UPU9 / Samd4
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 15033822
Gene end: 15117508
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101105
Ensembl peptide - ENSDARP00000129251
NCBI entrez gene - 100149858     See in Manteia.
swissprot - E7FBA1
ZFIN ID - ZDB-GENE-070720-7
Ensembl - ENSDARG00000075759
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMD4AENSGALG00000041790Gallus gallus
 Q9UPU9ENSG00000020577Homo sapiens
 1 ENSMUSG00000021838Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch1073-111c8.3 / Q5PRF9* / SAMD4B* / sterile alpha motif domain containing 4B*ENSDARG0000008673534


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR015327  Smaug, PHAT analogous topology


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IBA
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0043488 regulation of mRNA stability IEA
 cellular_componentGO:0000932 P-body IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0030371 translation repressor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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