ENSGALG00000041790


Gallus gallus

Features
Gene ID: ENSGALG00000041790
  
Biological name :SAMD4A
  
Synonyms : SAMD4A / sterile alpha motif domain containing 4A
  
Possible biological names infered from orthology : 1 / Q8CBY1 / Q9UPU9 / Samd4
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 56498666
Gene end: 56564359
  
Corresponding Affymetrix probe sets: Gga.11840.1.S1_s_at (Chicken Array)   Gga.13073.1.S1_at (Chicken Array)   Gga.2386.1.S1_at (Chicken Array)   Gga.7942.1.S1_at (Chicken Array)   GgaAffx.21580.1.S1_at (Chicken Array)   GgaAffx.23813.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057186
NCBI entrez gene - 423559     See in Manteia.
RefSeq - XM_015287926
RefSeq - XM_015287929
RefSeq - XM_015287927
RefSeq - XM_015287928
swissprot - A0A1D5PW57
Ensembl - ENSGALG00000041790
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 samd4aENSDARG00000075759Danio rerio
 Q9UPU9ENSG00000020577Homo sapiens
 1 ENSMUSG00000021838Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SAMD4B / sterile alpha motif domain containing 4B / Q5PRF9*ENSGALG0000004280456


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR015327  Smaug, PHAT analogous topology


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0043488 regulation of mRNA stability IEA
 biological_processGO:0045727 positive regulation of translation IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030371 translation repressor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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