ENSDARG00000076052


Danio rerio

Features
Gene ID: ENSDARG00000076052
  
Biological name :sez6l2
  
Synonyms : seizure related 6 homolog (mouse)-like 2 / sez6l2
  
Possible biological names infered from orthology : Q4V9Z5 / Q6UXD5 / Seizure 6-like protein 2 / seizure related 6 homolog like 2
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 15232181
Gene end: 15264732
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098597
Ensembl peptide - ENSDARP00000123167
swissprot - E7EXI2
swissprot - E9QD14
ZFIN ID - ZDB-GENE-091204-189
Ensembl - ENSDARG00000076052
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6UXD5ENSG00000174938Homo sapiens
 Q4V9Z5ENSMUSG00000030683Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sez6b / seizure related 6 homolog b / SEZ6* / Q7TSK2* / Q53EL9* / Seizure protein 6 * / seizure related 6 homolog*ENSDARG0000007941441
sez6a / seizure related 6 homolog a / SEZ6* / Q7TSK2* / Q53EL9* / Seizure protein 6 * / seizure related 6 homolog*ENSDARG0000010087640
sez6l / seizure related 6 homolog (mouse)-like / Q6P1D5* / Q9BYH1* / seizure related 6 homolog like*ENSDARG0000010059439
CSMD3 (1 of many) / si:ch211-236p22.1 / si:ch211-233f16.1 / CSMD3* / Q7Z407* / Q80T79* / CUB and Sushi multiple domains 3* / CUB and sushi domain-containing protein 3 *ENSDARG0000007792020
csmd2 / CUB and Sushi multiple domains 2 / Q7Z408*ENSDARG0000000155920
CSMD3 (1 of many) / si:ch211-236p22.1 / CSMD3* / Q7Z407* / Q80T79* / CUB and Sushi multiple domains 3* / CUB and sushi domain-containing protein 3 *ENSDARG0000007790519
svep1 / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 / A2AVA0* / Q4LDE5* / Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 *ENSDARG0000001352617


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
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 ZFA:0000155 somite somite U-shaped , abnormal
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 ZFA:0001117 post-vent region post-vent region shape , abnormal
post-vent region decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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