ENSDARG00000077920


Danio rerio

Features
Gene ID: ENSDARG00000077920
  
Biological name :CSMD3 (1 of many)
  
Synonyms : CSMD3 (1 of many) / si:ch211-233f16.1 / si:ch211-236p22.1
  
Possible biological names infered from orthology : CSMD3 / CUB and sushi domain-containing protein 3 / CUB and Sushi multiple domains 3 / Q7Z407 / Q80T79
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 44123618
Gene end: 44955710
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100304
Ensembl peptide - ENSDARP00000139551
swissprot - A0A0R4IS37
swissprot - E7FEQ4
ZFIN ID - ZDB-GENE-050419-118
ZFIN ID - ZDB-GENE-120214-1
Ensembl - ENSDARG00000077920
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSMD3ENSGALG00000031578Gallus gallus
 CSMD3ENSG00000164796Homo sapiens
 Csmd3ENSMUSG00000022311Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSMD3 (1 of many) / si:ch211-236p22.1 / CSMD3* / Q7Z407* / Q80T79* / CUB and Sushi multiple domains 3* / CUB and sushi domain-containing protein 3 *ENSDARG0000007790578
csmd2 / CUB and Sushi multiple domains 2 / Q7Z408*ENSDARG0000000155958
svep1 / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 / A2AVA0* / Q4LDE5* / Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 *ENSDARG0000001352620
sez6b / seizure related 6 homolog b / SEZ6* / Q7TSK2* / Q53EL9* / Seizure protein 6 * / seizure related 6 homolog*ENSDARG000000794146
sez6a / seizure related 6 homolog a / SEZ6* / Q7TSK2* / Q53EL9* / Seizure protein 6 * / seizure related 6 homolog*ENSDARG000001008765
sez6l2 / seizure related 6 homolog (mouse)-like 2 / Q4V9Z5* / Q6UXD5* / Seizure 6-like protein 2 * / seizure related 6 homolog like 2*ENSDARG000000760525
sez6l / seizure related 6 homolog (mouse)-like / Q6P1D5* / Q9BYH1* / seizure related 6 homolog like*ENSDARG000001005945


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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