ENSMUSG00000022311


Mus musculus

Features
Gene ID: ENSMUSG00000022311
  
Biological name :Csmd3
  
Synonyms : Csmd3 / CUB and sushi domain-containing protein 3 / Q80T79
  
Possible biological names infered from orthology : CUB and Sushi multiple domains 3 / Q7Z407
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: B3.3
Gene start: 47580637
Gene end: 48792063
  
Corresponding Affymetrix probe sets: 10428453 (MoGene1.0st)   10428509 (MoGene1.0st)   10428511 (MoGene1.0st)   10428513 (MoGene1.0st)   10428515 (MoGene1.0st)   10428517 (MoGene1.0st)   10428522 (MoGene1.0st)   1438272_at (Mouse Genome 430 2.0 Array)   1438572_at (Mouse Genome 430 2.0 Array)   1454245_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000098235
Ensembl peptide - ENSMUSP00000124195
Ensembl peptide - ENSMUSP00000124753
Ensembl peptide - ENSMUSP00000124775
NCBI entrez gene - 239420     See in Manteia.
MGI - MGI:2386403
RefSeq - XM_011245614
RefSeq - XM_006520912
RefSeq - XM_011245610
RefSeq - XM_011245611
RefSeq - XM_011245613
RefSeq - NM_001081391
RefSeq - XM_006520909
RefSeq - XM_006520910
RefSeq Peptide - NP_001074860
swissprot - F6TRD7
swissprot - E9PWJ0
swissprot - Q80T79
Ensembl - ENSMUSG00000022311
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSMD3 (1 of many)ENSDARG00000077920Danio rerio
 CSMD3 (1 of many)ENSDARG00000077905Danio rerio
 CSMD3ENSGALG00000031578Gallus gallus
 CSMD3ENSG00000164796Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Csmd1 / Q923L3 / CUB and sushi domain-containing protein 1 / CUB and Sushi multiple domains 1*ENSMUSG0000006092460
Csmd2 / CUB and Sushi multiple domains 2 / Q7Z408*ENSMUSG0000002880458
Svep1 / A2AVA0 / Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 / Q4LDE5* / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1*ENSMUSG0000002836921
Cr2 / complement C3d receptor 2 / P20023*ENSMUSG000000266167
Sez6l / Q6P1D5 / seizure related 6 homolog like / Q9BYH1*ENSMUSG000000581536
Sez6 / Q7TSK2 / Seizure protein 6 / Q53EL9* / seizure related 6 homolog*ENSMUSG000000006326
Q4V9Z5 / Sez6l2 / Seizure 6-like protein 2 / Q6UXD5* / seizure related 6 homolog like 2*ENSMUSG000000306835
Cr1l / Q64735 / Mus musculus complement component (3b/4b) receptor 1-like (Cr1l), transcript variant 2, mRNA. / Q2VPA4* / complement C3b/C4b receptor 1 like*ENSMUSG000000164813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain
 IPR035914  Spermadhesin, CUB domain superfamily
 IPR035976  Sushi/SCR/CCP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050773 regulation of dendrite development IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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