ENSMUSG00000028804


Mus musculus

Features
Gene ID: ENSMUSG00000028804
  
Biological name :Csmd2
  
Synonyms : Csmd2 / CUB and Sushi multiple domains 2
  
Possible biological names infered from orthology : Q7Z408
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 127987857
Gene end: 128567656
  
Corresponding Affymetrix probe sets: 10508272 (MoGene1.0st)   1419788_at (Mouse Genome 430 2.0 Array)   1457148_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152795
Ensembl peptide - ENSMUSP00000138958
NCBI entrez gene - 329942     See in Manteia.
MGI - MGI:2386401
RefSeq - NM_001281955
RefSeq - XM_011240560
RefSeq Peptide - NP_001268884
swissprot - A0A1Y7VP35
swissprot - V9GX34
Ensembl - ENSMUSG00000028804
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 csmd2ENSDARG00000001559Danio rerio
 CSMD2ENSGALG00000030229Gallus gallus
 CSMD2ENSG00000121904Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Csmd1 / Q923L3 / CUB and sushi domain-containing protein 1 / CUB and Sushi multiple domains 1*ENSMUSG0000006092464
Csmd3 / Q80T79 / CUB and sushi domain-containing protein 3 / Q7Z407* / CUB and Sushi multiple domains 3*ENSMUSG0000002231159
Svep1 / A2AVA0 / Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 / Q4LDE5* / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1*ENSMUSG0000002836922
Cr2 / complement C3d receptor 2 / P20023*ENSMUSG000000266167
Sez6l / Q6P1D5 / seizure related 6 homolog like / Q9BYH1*ENSMUSG000000581536
Sez6 / Q7TSK2 / Seizure protein 6 / Q53EL9* / seizure related 6 homolog*ENSMUSG000000006326
Q4V9Z5 / Sez6l2 / Seizure 6-like protein 2 / Q6UXD5* / seizure related 6 homolog like 2*ENSMUSG000000306835
Cr1l / Q64735 / Mus musculus complement component (3b/4b) receptor 1-like (Cr1l), transcript variant 2, mRNA. / Q2VPA4* / complement C3b/C4b receptor 1 like*ENSMUSG000000164813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain
 IPR035914  Spermadhesin, CUB domain superfamily
 IPR035976  Sushi/SCR/CCP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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