ENSDARG00000001559


Danio rerio

Features
Gene ID: ENSDARG00000001559
  
Biological name :csmd2
  
Synonyms : csmd2 / CUB and Sushi multiple domains 2
  
Possible biological names infered from orthology : Q7Z408
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 36114846
Gene end: 36675023
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114742
Ensembl peptide - ENSDARP00000153091
Ensembl peptide - ENSDARP00000155150
Ensembl peptide - ENSDARP00000157039
swissprot - F1QDK6
ZFIN ID - ZDB-GENE-030616-39
Ensembl - ENSDARG00000001559
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSMD2ENSGALG00000030229Gallus gallus
 CSMD2ENSG00000121904Homo sapiens
 Csmd2ENSMUSG00000028804Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSMD3 (1 of many) / si:ch211-236p22.1 / CSMD3* / Q7Z407* / Q80T79* / CUB and Sushi multiple domains 3* / CUB and sushi domain-containing protein 3 *ENSDARG0000007790556
CSMD3 (1 of many) / si:ch211-236p22.1 / si:ch211-233f16.1 / CSMD3* / Q7Z407* / Q80T79* / CUB and Sushi multiple domains 3* / CUB and sushi domain-containing protein 3 *ENSDARG0000007792056
svep1 / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 / A2AVA0* / Q4LDE5* / Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 *ENSDARG0000001352620
sez6a / seizure related 6 homolog a / SEZ6* / Q7TSK2* / Q53EL9* / Seizure protein 6 * / seizure related 6 homolog*ENSDARG000001008766
sez6b / seizure related 6 homolog b / SEZ6* / Q7TSK2* / Q53EL9* / Seizure protein 6 * / seizure related 6 homolog*ENSDARG000000794146
sez6l / seizure related 6 homolog (mouse)-like / Q6P1D5* / Q9BYH1* / seizure related 6 homolog like*ENSDARG000001005945
sez6l2 / seizure related 6 homolog (mouse)-like 2 / Q4V9Z5* / Q6UXD5* / Seizure 6-like protein 2 * / seizure related 6 homolog like 2*ENSDARG000000760525


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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