ENSG00000121904


Homo sapiens

Features
Gene ID: ENSG00000121904
  
Biological name :CSMD2
  
Synonyms : CSMD2 / CUB and Sushi multiple domains 2 / Q7Z408
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p35.1
Gene start: 33513999
Gene end: 34165842
  
Corresponding Affymetrix probe sets: 1557143_at (Human Genome U133 Plus 2.0 Array)   1570169_at (Human Genome U133 Plus 2.0 Array)   233145_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362486
Ensembl peptide - ENSP00000362479
Ensembl peptide - ENSP00000483463
Ensembl peptide - ENSP00000241312
Ensembl peptide - ENSP00000340311
Ensembl peptide - ENSP00000362475
Ensembl peptide - ENSP00000362478
NCBI entrez gene - 114784     See in Manteia.
OMIM - 608398
RefSeq - XM_017000194
RefSeq - NM_001281956
RefSeq - NM_052896
RefSeq - XM_017000188
RefSeq - XM_017000189
RefSeq - XM_017000190
RefSeq - XM_017000191
RefSeq - XM_017000192
RefSeq - XM_017000193
RefSeq - XM_017000185
RefSeq - XM_017000186
RefSeq - XM_017000187
RefSeq Peptide - NP_001268885
RefSeq Peptide - NP_443128
swissprot - Q5T6B5
swissprot - Q5TAH7
swissprot - Q7Z408
swissprot - A0A087X0K4
Ensembl - ENSG00000121904
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 csmd2ENSDARG00000001559Danio rerio
 CSMD2ENSGALG00000030229Gallus gallus
 Csmd2ENSMUSG00000028804Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSMD1 / CUB and Sushi multiple domains 1ENSG0000018311764
CSMD3 / Q7Z407 / CUB and Sushi multiple domains 3ENSG0000016479659
SVEP1 / Q4LDE5 / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1ENSG0000016512422
CR1 / P17927 / complement C3b/C4b receptor 1 (Knops blood group)ENSG0000020371012
CR2 / P20023 / complement C3d receptor 2ENSG000001173228
SEZ6L / Q9BYH1 / seizure related 6 homolog likeENSG000001000957
SEZ6 / Q53EL9 / seizure related 6 homologENSG000000630156
Q6UXD5 / SEZ6L2 / seizure related 6 homolog like 2ENSG000001749385
CR1L / Q2VPA4 / complement C3b/C4b receptor 1 likeENSG000001977214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain
 IPR035914  Spermadhesin, CUB domain superfamily
 IPR035976  Sushi/SCR/CCP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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