ENSG00000183117


Homo sapiens

Features
Gene ID: ENSG00000183117
  
Biological name :CSMD1
  
Synonyms : CSMD1 / CUB and Sushi multiple domains 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: p23.2
Gene start: 2935353
Gene end: 4994972
  
Corresponding Affymetrix probe sets: 1553405_a_at (Human Genome U133 Plus 2.0 Array)   1562329_at (Human Genome U133 Plus 2.0 Array)   1562330_s_at (Human Genome U133 Plus 2.0 Array)   231223_at (Human Genome U133 Plus 2.0 Array)   241960_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000441462
Ensembl peptide - ENSP00000473359
Ensembl peptide - ENSP00000489225
Ensembl peptide - ENSP00000473617
Ensembl peptide - ENSP00000334828
Ensembl peptide - ENSP00000383047
Ensembl peptide - ENSP00000430733
NCBI entrez gene - 64478     See in Manteia.
OMIM - 608397
RefSeq - XM_017013731
RefSeq - NM_033225
RefSeq - XM_011534752
RefSeq - XM_011534753
RefSeq - XM_011534754
RefSeq Peptide - NP_150094
swissprot - E5RIG2
swissprot - A0A0U1RQY1
swissprot - F5GZ18
swissprot - F8W9C3
swissprot - H7BXU2
Ensembl - ENSG00000183117
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSMD1ENSGALG00000035230Gallus gallus
 Csmd1ENSMUSG00000060924Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSMD2 / Q7Z408 / CUB and Sushi multiple domains 2ENSG0000012190465
CSMD3 / Q7Z407 / CUB and Sushi multiple domains 3ENSG0000016479663
SVEP1 / Q4LDE5 / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1ENSG0000016512422
CR1 / P17927 / complement C3b/C4b receptor 1 (Knops blood group)ENSG0000020371012
CR2 / P20023 / complement C3d receptor 2ENSG000001173228
SEZ6L / Q9BYH1 / seizure related 6 homolog likeENSG000001000956
SEZ6 / Q53EL9 / seizure related 6 homologENSG000000630156
Q6UXD5 / SEZ6L2 / seizure related 6 homolog like 2ENSG000001749385
CR1L / Q2VPA4 / complement C3b/C4b receptor 1 likeENSG000001977214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain
 IPR035914  Spermadhesin, CUB domain superfamily
 IPR035976  Sushi/SCR/CCP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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