ENSG00000165124


Homo sapiens

Features
Gene ID: ENSG00000165124
  
Biological name :SVEP1
  
Synonyms : Q4LDE5 / sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 / SVEP1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q31.3
Gene start: 110365251
Gene end: 110579880
  
Corresponding Affymetrix probe sets: 1553129_at (Human Genome U133 Plus 2.0 Array)   1566721_at (Human Genome U133 Plus 2.0 Array)   1566722_a_at (Human Genome U133 Plus 2.0 Array)   213247_at (Human Genome U133 Plus 2.0 Array)   219552_at (Human Genome U133 Plus 2.0 Array)   224543_at (Human Genome U133 Plus 2.0 Array)   236927_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000363593
Ensembl peptide - ENSP00000384917
Ensembl peptide - ENSP00000363585
NCBI entrez gene - 79987     See in Manteia.
OMIM - 611691
RefSeq - NM_153366
RefSeq Peptide - NP_699197
swissprot - A0A0A0MSD0
swissprot - Q4LDE5
Ensembl - ENSG00000165124
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 svep1ENSDARG00000013526Danio rerio
 SVEP1ENSGALG00000015721Gallus gallus
 Svep1ENSMUSG00000028369Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSMD1 / CUB and Sushi multiple domains 1ENSG0000018311722
CSMD3 / Q7Z407 / CUB and Sushi multiple domains 3ENSG0000016479622
CSMD2 / Q7Z408 / CUB and Sushi multiple domains 2ENSG0000012190422
CR1 / P17927 / complement C3b/C4b receptor 1 (Knops blood group)ENSG0000020371011
CR2 / P20023 / complement C3d receptor 2ENSG000001173228
SEZ6L / Q9BYH1 / seizure related 6 homolog likeENSG000001000956
Q6UXD5 / SEZ6L2 / seizure related 6 homolog like 2ENSG000001749385
SEZ6 / Q53EL9 / seizure related 6 homologENSG000000630155
CR1L / Q2VPA4 / complement C3b/C4b receptor 1 likeENSG000001977214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000436  Sushi/SCR/CCP domain
 IPR000742  EGF-like domain
 IPR001759  Pentraxin-related
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR003410  HYR domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR011641  Tyrosine-protein kinase ephrin type A/B receptor-like
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR018097  EGF-like calcium-binding, conserved site
 IPR028768  Sushi repeat-containing protein SRPX2
 IPR035976  Sushi/SCR/CCP superfamily
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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