ENSDARG00000076568


Danio rerio

Features
Gene ID: ENSDARG00000076568
  
Biological name :sec61b
  
Synonyms : sec61b / Sec61 translocon beta subunit
  
Possible biological names infered from orthology : Gm10320 / P60468 / Protein transport protein Sec61 subunit beta / Q9CQS8
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 27224068
Gene end: 27231659
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000059012
Ensembl peptide - ENSDARP00000124930
NCBI entrez gene - 791986     See in Manteia.
RefSeq - NM_001002527
RefSeq Peptide - NP_001002527
swissprot - F8W5Y7
swissprot - Q6DGH3
ZFIN ID - ZDB-GENE-040718-260
Ensembl - ENSDARG00000076568
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEC61BENSGALG00000013569Gallus gallus
 P60468ENSG00000106803Homo sapiens
 Gm10320ENSMUSG00000092116Mus musculus
 Q9CQS8ENSMUSG00000053317Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR016482  Protein transport protein SecG/Sec61-beta/Sbh
 IPR030671  Protein transport Sec61-beta/Sbh


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IBA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0031204 posttranslational protein targeting to membrane, translocation IBA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005784 Sec61 translocon complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031205 endoplasmic reticulum Sec complex IBA
 molecular_functionGO:0005086 ARF guanyl-nucleotide exchange factor activity IBA
 molecular_functionGO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000018190 asna1 / Q6IQE5 / arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) / O43681* / O54984* / ATPase Asna1 *  / reaction
 ENSDARG00000005675 sec61a1l / Sec61 translocon alpha 1 subunit, like / P61620* / P61619* / SEC61A1* / Sec61 translocon alpha 1 subunit* / Protein transport protein Sec61 subunit alpha isoform 1 *  / complex
 ENSDARG00000021669 Q90ZM2 / sec61a1 / Sec61 translocon alpha 1 subunit / P61619* / P61620* / Protein transport protein Sec61 subunit alpha isoform 1 *  / complex
 ENSDARG00000018637 sec61g / Sec61 translocon gamma subunit / P60059* / P60060* / Protein transport protein Sec61 subunit gamma *  / complex






 

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