ENSGALG00000013569


Gallus gallus

Features
Gene ID: ENSGALG00000013569
  
Biological name :SEC61B
  
Synonyms : SEC61B / Sec61 translocon beta subunit
  
Possible biological names infered from orthology : Gm10320 / P60468 / Protein transport protein Sec61 subunit beta / Q9CQS8
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 90002436
Gene end: 90006678
  
Corresponding Affymetrix probe sets: Gga.4962.2.S1_s_at (Chicken Array)   Gga.5772.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022049
NCBI entrez gene - 420997     See in Manteia.
RefSeq - NM_001302159
RefSeq Peptide - NP_001289088
swissprot - F1NWX7
Ensembl - ENSGALG00000013569
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec61bENSDARG00000076568Danio rerio
 P60468ENSG00000106803Homo sapiens
 Gm10320ENSMUSG00000092116Mus musculus
 Q9CQS8ENSMUSG00000053317Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR016482  Protein transport protein SecG/Sec61-beta/Sbh
 IPR030671  Protein transport Sec61-beta/Sbh


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000060 protein import into nucleus, translocation IEA
 biological_processGO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IBA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:0030970 retrograde protein transport, ER to cytosol IEA
 biological_processGO:0031204 posttranslational protein targeting to membrane, translocation IBA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005784 Sec61 translocon complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031205 endoplasmic reticulum Sec complex IBA
 molecular_functionGO:0005086 ARF guanyl-nucleotide exchange factor activity IBA
 molecular_functionGO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IBA
 molecular_functionGO:0048408 epidermal growth factor binding IEA


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005966 SEC61A1 / Sec61 translocon alpha 1 subunit / P61619* / P61620* / Protein transport protein Sec61 subunit alpha isoform 1 *  / complex
 ENSGALG00000015308 SEC63 / SEC63 homolog, protein translocation regulator / Q8VHE0* / Q9UGP8* / Mus musculus SEC63-like (S. cerevisiae) (Sec63), transcript variant 2, mRNA.*  / complex
 ENSGALG00000009379 SEC62 / Q5F3A1 / Translocation protein SEC62 / Q99442* / Q8BU14* / SEC62 homolog, preprotein translocation factor*  / complex
 ENSGALG00000037863 SEC61G / Sec61 translocon gamma subunit / P60059* / P60060* / Protein transport protein Sec61 subunit gamma *  / complex
 ENSGALG00000036300 SEC61A2 / Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. / Q9JLR1* / Q9H9S3* / Sec61 translocon alpha 2 subunit* / Sec61, alpha subunit 2 (S. cerevisiae)*  / complex






 

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