ENSGALG00000009379


Gallus gallus

Features
Gene ID: ENSGALG00000009379
  
Biological name :SEC62
  
Synonyms : Q5F3A1 / SEC62 / Translocation protein SEC62
  
Possible biological names infered from orthology : Q8BU14 / Q99442 / SEC62 homolog, preprotein translocation factor
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 19957861
Gene end: 19973581
  
Corresponding Affymetrix probe sets: Gga.16350.1.S1_at (Chicken Array)   GgaAffx.21474.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015260
Ensembl peptide - ENSGALP00000059097
Ensembl peptide - ENSGALP00000052377
NCBI entrez gene - 424993     See in Manteia.
RefSeq - NM_001012602
RefSeq Peptide - NP_001012620
swissprot - A0A1L1RK16
swissprot - A0A1D5PHU6
swissprot - Q5F3A1
Ensembl - ENSGALG00000009379
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec62ENSDARG00000019951Danio rerio
 SEC62ENSG00000008952Homo sapiens
 Sec62ENSMUSG00000027706Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004728  Translocation protein Sec62
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006620 posttranslational protein targeting to endoplasmic reticulum membrane IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005966 SEC61A1 / Sec61 translocon alpha 1 subunit / P61619* / P61620* / Protein transport protein Sec61 subunit alpha isoform 1 *  / complex
 ENSGALG00000013569 SEC61B / Sec61 translocon beta subunit / P60468* / Q9CQS8* / Gm10320* / Protein transport protein Sec61 subunit beta *  / complex
 ENSGALG00000015308 SEC63 / SEC63 homolog, protein translocation regulator / Q8VHE0* / Q9UGP8* / Mus musculus SEC63-like (S. cerevisiae) (Sec63), transcript variant 2, mRNA.*  / complex
 ENSGALG00000037863 SEC61G / Sec61 translocon gamma subunit / P60059* / P60060* / Protein transport protein Sec61 subunit gamma *  / complex
 ENSGALG00000036300 SEC61A2 / Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. / Q9JLR1* / Q9H9S3* / Sec61 translocon alpha 2 subunit* / Sec61, alpha subunit 2 (S. cerevisiae)*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr