ENSGALG00000005966


Gallus gallus

Features
Gene ID: ENSGALG00000005966
  
Biological name :SEC61A1
  
Synonyms : SEC61A1 / Sec61 translocon alpha 1 subunit
  
Possible biological names infered from orthology : P61619 / P61620 / Protein transport protein Sec61 subunit alpha isoform 1
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 9551302
Gene end: 9559833
  
Corresponding Affymetrix probe sets: GgaAffx.3713.1.S1_at (Chicken Array)   GgaAffx.3713.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009577
NCBI entrez gene - 416023     See in Manteia.
RefSeq - XM_414364
swissprot - F1NBN1
Ensembl - ENSGALG00000005966
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q90ZM2ENSDARG00000021669Danio rerio
 sec61a1lENSDARG00000005675Danio rerio
 P61619ENSG00000058262Homo sapiens
 P61620ENSMUSG00000030082Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEC61A2 / Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. / Q9JLR1* / Q9H9S3* / Sec61 translocon alpha 2 subunit* / Sec61, alpha subunit 2 (S. cerevisiae)*ENSGALG0000003630093


Protein motifs (from Interpro)
Interpro ID Name
 IPR002208  SecY/SEC61-alpha family
 IPR019561  Translocon Sec61/SecY, plug domain
 IPR023201  SecY domain superfamily
 IPR030659  SecY conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006613 cotranslational protein targeting to membrane IEA
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA
 biological_processGO:0006620 posttranslational protein targeting to endoplasmic reticulum membrane IEA
 biological_processGO:0007029 endoplasmic reticulum organization IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0039019 pronephric nephron development IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000037863 SEC61G / Sec61 translocon gamma subunit / P60059* / P60060* / Protein transport protein Sec61 subunit gamma *  / complex
 ENSGALG00000009379 SEC62 / Q5F3A1 / Translocation protein SEC62 / Q99442* / Q8BU14* / SEC62 homolog, preprotein translocation factor*  / complex
 ENSGALG00000015308 SEC63 / SEC63 homolog, protein translocation regulator / Q8VHE0* / Q9UGP8* / Mus musculus SEC63-like (S. cerevisiae) (Sec63), transcript variant 2, mRNA.*  / complex
 ENSGALG00000013569 SEC61B / Sec61 translocon beta subunit / P60468* / Q9CQS8* / Gm10320* / Protein transport protein Sec61 subunit beta *  / complex
 ENSGALG00000036300 SEC61A2 / Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. / Q9JLR1* / Q9H9S3* / Sec61 translocon alpha 2 subunit* / Sec61, alpha subunit 2 (S. cerevisiae)*  / complex






 

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