ENSDARG00000077442


Danio rerio

Features
Gene ID: ENSDARG00000077442
  
Biological name :tubgcp5
  
Synonyms : tubgcp5 / tubulin, gamma complex associated protein 5
  
Possible biological names infered from orthology : Q8BKN5 / Q96RT8
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 37623693
Gene end: 37652517
  
Corresponding Affymetrix probe sets: Dr.68.1.A1_at (Zebrafish Array)   NM_001018141_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120432
Ensembl peptide - ENSDARP00000155100
Ensembl peptide - ENSDARP00000065121
NCBI entrez gene - 553191     See in Manteia.
RefSeq - XM_021476870
RefSeq - XM_009302519
RefSeq - XM_021476871
RefSeq - NM_001018141
RefSeq - XM_005165984
RefSeq Peptide - NP_001018151
swissprot - F1QBQ4
ZFIN ID - ZDB-GENE-050522-344
Ensembl - ENSDARG00000077442
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TUBGCP5ENSGALG00000016735Gallus gallus
 Q96RT8ENSG00000275835Homo sapiens
 Q8BKN5ENSMUSG00000033790Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
appl2 / adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 / Q96RT7* / TUBGCP6* / tubulin gamma complex associated protein 6*ENSDARG0000010015116
tubgcp3 / tubulin, gamma complex associated protein 3 / P58854* / Q96CW5*ENSDARG0000002913315
tubgcp2 / tubulin, gamma complex associated protein 2 / Q921G8* / Q9BSJ2*ENSDARG0000001307912
tubgcp4 / tubulin, gamma complex associated protein 4 / Q9D4F8* / Q9UGJ1*ENSDARG0000000537412


Protein motifs (from Interpro)
Interpro ID Name
 IPR007259  Gamma-tubulin complex component protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 biological_processGO:0007020 microtubule nucleation IEA
 biological_processGO:0031122 cytoplasmic microtubule organization IBA
 biological_processGO:0051298 centrosome duplication IBA
 biological_processGO:0051321 meiotic cell cycle IBA
 biological_processGO:0051415 microtubule nucleation by interphase microtubule organizing center IBA
 biological_processGO:0090307 mitotic spindle assembly IBA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0000923 equatorial microtubule organizing center IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0008274 gamma-tubulin ring complex IBA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IBA
 molecular_functionGO:0043015 gamma-tubulin binding IBA
 molecular_functionGO:0051011 microtubule minus-end binding IBA


Pathways (from Reactome)
Pathway description
Recruitment of mitotic centrosome proteins and complexes
Recruitment of NuMA to mitotic centrosomes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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