ENSDARG00000013079


Danio rerio

Features
Gene ID: ENSDARG00000013079
  
Biological name :tubgcp2
  
Synonyms : tubgcp2 / tubulin, gamma complex associated protein 2
  
Possible biological names infered from orthology : Q921G8 / Q9BSJ2
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 9183626
Gene end: 9218258
  
Corresponding Affymetrix probe sets: Dr.3637.1.A1_at (Zebrafish Array)   NM_200122_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014990
NCBI entrez gene - 386975     See in Manteia.
RefSeq - NM_200122
RefSeq Peptide - NP_956416
swissprot - F1QT47
ZFIN ID - ZDB-GENE-031118-150
Ensembl - ENSDARG00000013079
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TUBGCP2ENSGALG00000003526Gallus gallus
 Q9BSJ2ENSG00000130640Homo sapiens
 Q921G8ENSMUSG00000025474Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tubgcp3 / tubulin, gamma complex associated protein 3 / P58854* / Q96CW5*ENSDARG0000002913318
appl2 / adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 / Q96RT7* / TUBGCP6* / tubulin gamma complex associated protein 6*ENSDARG0000010015117
tubgcp5 / tubulin, gamma complex associated protein 5 / Q8BKN5* / Q96RT8*ENSDARG0000007744214
tubgcp4 / tubulin, gamma complex associated protein 4 / Q9D4F8* / Q9UGJ1*ENSDARG0000000537411


Protein motifs (from Interpro)
Interpro ID Name
 IPR007259  Gamma-tubulin complex component protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 biological_processGO:0007020 microtubule nucleation IEA
 biological_processGO:0031122 cytoplasmic microtubule organization IBA
 biological_processGO:0051298 centrosome duplication IBA
 biological_processGO:0051321 meiotic cell cycle IBA
 biological_processGO:0051415 microtubule nucleation by interphase microtubule organizing center IBA
 biological_processGO:0090307 mitotic spindle assembly IBA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0000923 equatorial microtubule organizing center IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0008275 gamma-tubulin small complex IBA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IBA
 molecular_functionGO:0043015 gamma-tubulin binding IBA
 molecular_functionGO:0051011 microtubule minus-end binding IBA


Pathways (from Reactome)
Pathway description
Recruitment of mitotic centrosome proteins and complexes
Recruitment of NuMA to mitotic centrosomes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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