ENSDARG00000077584


Danio rerio

Features
Gene ID: ENSDARG00000077584
  
Biological name :cln6a
  
Synonyms : cln6a / CLN6, transmembrane ER protein a
  
Possible biological names infered from orthology : ceroid-lipofuscinosis, neuronal 6 / CLN6 / CLN6, transmembrane ER protein / Q9NWW5
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 34487833
Gene end: 34492609
  
Corresponding Affymetrix probe sets: Dr.14969.1.A1_at (Zebrafish Array)   NM_001005982_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000142908
NCBI entrez gene - 449809     See in Manteia.
RefSeq - NM_001005982
RefSeq - XM_005168975
RefSeq Peptide - NP_001005982
swissprot - A0A1D5NSU0
ZFIN ID - ZDB-GENE-041010-57
Ensembl - ENSDARG00000077584
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLN6ENSGALG00000007981Gallus gallus
 CLN6ENSG00000128973Homo sapiens
 Cln6ENSMUSG00000032245Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cln6b / CLN6, transmembrane ER protein b / CLN6* / Q9NWW5* / CLN6, transmembrane ER protein* / ceroid-lipofuscinosis, neuronal 6*ENSDARG0000009000259


Protein motifs (from Interpro)
Interpro ID Name
 IPR029255  Ceroid-lipofuscinosis neuronal protein 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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