ENSDARG00000090002


Danio rerio

Features
Gene ID: ENSDARG00000090002
  
Biological name :cln6b
  
Synonyms : cln6b / CLN6, transmembrane ER protein b
  
Possible biological names infered from orthology : ceroid-lipofuscinosis, neuronal 6 / CLN6 / CLN6, transmembrane ER protein / Q9NWW5
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 1325946
Gene end: 1334504
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105874
Ensembl peptide - ENSDARP00000152438
Ensembl peptide - ENSDARP00000154735
NCBI entrez gene - 570764     See in Manteia.
swissprot - E7F4M8
ZFIN ID - ZDB-GENE-110623-6
Ensembl - ENSDARG00000090002
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLN6ENSGALG00000007981Gallus gallus
 CLN6ENSG00000128973Homo sapiens
 Cln6ENSMUSG00000032245Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cln6a / CLN6, transmembrane ER protein a / CLN6* / Q9NWW5* / CLN6, transmembrane ER protein* / ceroid-lipofuscinosis, neuronal 6*ENSDARG0000007758456


Protein motifs (from Interpro)
Interpro ID Name
 IPR029255  Ceroid-lipofuscinosis neuronal protein 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007040 lysosome organization IBA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr