ENSDARG00000078324


Danio rerio

Features
Gene ID: ENSDARG00000078324
  
Biological name :PRDM16
  
Synonyms : PRDM16 / si:ch211-263k4.2
  
Possible biological names infered from orthology : A2A935 / PR domain zinc finger protein 16 / PR/SET domain 16 / Q9HAZ2
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 48480529
Gene end: 48541957
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000080488
Ensembl peptide - ENSDARP00000107731
Ensembl peptide - ENSDARP00000154637
swissprot - B8A5T9
swissprot - F1Q833
ZFIN ID - ZDB-GENE-081104-207
Ensembl - ENSDARG00000078324
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PRDM16ENSGALG00000036728Gallus gallus
 PRDM16ENSG00000142611Homo sapiens
 A2A935ENSMUSG00000039410Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mecom / MDS1 and EVI1 complex locus / Q03112*ENSDARG0000006080837
prdm13 / PR domain containing 13 / E9PZZ1* / Q9H4Q3* / PR/SET domain 13* / PR domain zinc finger protein 13 *ENSDARG0000007870111


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR030413  Transcription factor hamlet


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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