ENSDARG00000078701


Danio rerio

Features
Gene ID: ENSDARG00000078701
  
Biological name :prdm13
  
Synonyms : prdm13 / PR domain containing 13
  
Possible biological names infered from orthology : E9PZZ1 / PR domain zinc finger protein 13 / PR/SET domain 13 / Q9H4Q3
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 32749591
Gene end: 32755900
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121562
NCBI entrez gene - 796276     See in Manteia.
RefSeq - NM_001326454
RefSeq Peptide - NP_001313383
swissprot - F1R7D7
ZFIN ID - ZDB-GENE-080616-1
Ensembl - ENSDARG00000078701
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PRDM13ENSGALG00000038476Gallus gallus
 PRDM13ENSG00000112238Homo sapiens
 E9PZZ1ENSMUSG00000040478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRDM16 / si:ch211-263k4.2 / A2A935* / Q9HAZ2* / PR/SET domain 16* / PR domain zinc finger protein 16 *ENSDARG0000007832417
mecom / MDS1 and EVI1 complex locus / Q03112*ENSDARG0000006080812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr