ENSDARG00000078658


Danio rerio

Features
Gene ID: ENSDARG00000078658
  
Biological name :supt20
  
Synonyms : SPT20 homolog, SAGA complex component / supt20
  
Possible biological names infered from orthology : Q7TT00 / Q8NEM7 / SUPT20H / Transcription factor SPT20 homolog
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 35012094
Gene end: 35052198
  
Corresponding Affymetrix probe sets: Dr.19925.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000120953
Ensembl peptide - ENSDARP00000154829
Ensembl peptide - ENSDARP00000098157
Ensembl peptide - ENSDARP00000114375
NCBI entrez gene - 568453     See in Manteia.
swissprot - E9QI95
swissprot - F1QGL0
swissprot - F1QKI6
ZFIN ID - ZDB-GENE-091204-264
Ensembl - ENSDARG00000078658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SUPT20HENSGALG00000017047Gallus gallus
 Q8NEM7ENSG00000102710Homo sapiens
 Q7TT00ENSMUSG00000027751Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021950  Transcription factor Spt20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0000124 SAGA complex IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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