ENSG00000102710


Homo sapiens

Features
Gene ID: ENSG00000102710
  
Biological name :SUPT20H
  
Synonyms : Q8NEM7 / SPT20 homolog, SAGA complex component / SUPT20H
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q13.3
Gene start: 37009312
Gene end: 37059713
  
Corresponding Affymetrix probe sets: 216682_s_at (Human Genome U133 Plus 2.0 Array)   216717_at (Human Genome U133 Plus 2.0 Array)   220408_x_at (Human Genome U133 Plus 2.0 Array)   221774_x_at (Human Genome U133 Plus 2.0 Array)   226330_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420170
Ensembl peptide - ENSP00000419787
Ensembl peptide - ENSP00000439000
Ensembl peptide - ENSP00000473592
Ensembl peptide - ENSP00000473416
Ensembl peptide - ENSP00000218894
Ensembl peptide - ENSP00000348512
Ensembl peptide - ENSP00000353388
Ensembl peptide - ENSP00000417510
Ensembl peptide - ENSP00000419754
NCBI entrez gene - 55578     See in Manteia.
OMIM - 613417
RefSeq - XM_017020661
RefSeq - XM_005266462
RefSeq - XM_005266464
RefSeq - XM_005266465
RefSeq - XM_005266467
RefSeq - XM_017020653
RefSeq - XM_017020654
RefSeq - XM_017020655
RefSeq - XM_017020656
RefSeq - XM_017020657
RefSeq - XM_017020658
RefSeq - XM_017020659
RefSeq - XM_017020660
RefSeq - NM_001014286
RefSeq - NM_001278480
RefSeq - NM_001278481
RefSeq - NM_001278482
RefSeq - NM_017569
RefSeq - XM_005266447
RefSeq - XM_005266449
RefSeq - XM_005266451
RefSeq - XM_005266454
RefSeq - XM_005266455
RefSeq - XM_005266456
RefSeq - XM_005266457
RefSeq - XM_005266458
RefSeq - XM_005266460
RefSeq - XM_005266461
RefSeq Peptide - NP_060039
RefSeq Peptide - NP_001265411
RefSeq Peptide - NP_001014308
RefSeq Peptide - NP_001265409
RefSeq Peptide - NP_001265410
swissprot - R4GND2
swissprot - A0A024RDW2
swissprot - Q8NEM7
swissprot - B4E2D5
swissprot - F6S7C4
swissprot - H7C5F9
swissprot - C9JQS2
Ensembl - ENSG00000102710
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 supt20ENSDARG00000078658Danio rerio
 SUPT20HENSGALG00000017047Gallus gallus
 Q7TT00ENSMUSG00000027751Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021950  Transcription factor Spt20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007369 gastrulation IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0070461 SAGA-type complex IDA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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