ENSGALG00000017047


Gallus gallus

Features
Gene ID: ENSGALG00000017047
  
Biological name :SUPT20H
  
Synonyms : SUPT20H / transcription factor SPT20 homolog
  
Possible biological names infered from orthology : Q7TT00 / Q8NEM7 / SPT20 homolog, SAGA complex component / Supt20
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 172275788
Gene end: 172309370
  
Corresponding Affymetrix probe sets: GgaAffx.11616.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044490
Ensembl peptide - ENSGALP00000035685
NCBI entrez gene - 418896     See in Manteia.
RefSeq - XM_015277793
RefSeq - XM_015277779
RefSeq - XM_015277782
RefSeq - XM_015277786
RefSeq - NM_001006275
RefSeq - XM_015277740
RefSeq - XM_015277745
RefSeq - XM_015277755
RefSeq - XM_015277763
RefSeq - XM_015277765
RefSeq - XM_015277769
RefSeq - XM_015277772
RefSeq Peptide - NP_001006275
swissprot - F1N922
swissprot - A0A1D5NVW1
Ensembl - ENSGALG00000017047
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 supt20ENSDARG00000078658Danio rerio
 Q8NEM7ENSG00000102710Homo sapiens
 Q7TT00ENSMUSG00000027751Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021950  Transcription factor Spt20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035948 positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0070461 SAGA-type complex IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr