ENSDARG00000079202


Danio rerio

Features
Gene ID: ENSDARG00000079202
  
Biological name :parp2
  
Synonyms : parp2 / poly (ADP-ribose) polymerase 2
  
Possible biological names infered from orthology : O88554 / Q9UGN5
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 37836821
Gene end: 37846849
  
Corresponding Affymetrix probe sets: Dr.12458.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118376
Ensembl peptide - ENSDARP00000119752
Ensembl peptide - ENSDARP00000103156
NCBI entrez gene - 100007906     See in Manteia.
RefSeq - NM_001204270
RefSeq Peptide - NP_001191199
swissprot - F1QLV3
swissprot - F1QAF7
swissprot - F1R459
ZFIN ID - ZDB-GENE-031113-6
Ensembl - ENSDARG00000079202
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PARP2ENSG00000129484Homo sapiens
 Parp2ENSMUSG00000036023Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
parp1 / poly (ADP-ribose) polymerase 1 / P09874* / poly (ADP-ribose) polymerase family, member 1*ENSDARG0000001952933
parp3 / poly (ADP-ribose) polymerase family, member 3 / Q9Y6F1*ENSDARG0000000396129


Protein motifs (from Interpro)
Interpro ID Name
 IPR004102  Poly(ADP-ribose) polymerase, regulatory domain
 IPR004170  WWE domain
 IPR008893  WGR domain
 IPR012317  Poly(ADP-ribose) polymerase, catalytic domain
 IPR018123  WWE domain, subgroup


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006273 lagging strand elongation IBA
 biological_processGO:0006471 protein ADP-ribosylation IEA
 biological_processGO:0051103 DNA ligation involved in DNA repair IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003910 DNA ligase (ATP) activity IBA
 molecular_functionGO:0003950 NAD+ ADP-ribosyltransferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
POLB-Dependent Long Patch Base Excision Repair
HDR through MMEJ (alt-NHEJ)
DNA Damage Recognition in GG-NER
Formation of Incision Complex in GG-NER
Dual Incision in GG-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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