ENSDARG00000079257


Danio rerio

Features
Gene ID: ENSDARG00000079257
  
Biological name :gemin5
  
Synonyms : gemin5 / gem (nuclear organelle) associated protein 5
  
Possible biological names infered from orthology : Gem-associated protein 5 / Q8BX17 / Q8TEQ6
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 36366872
Gene end: 36439977
  
Corresponding Affymetrix probe sets: Dr.17767.1.S1_at (Zebrafish Array)   Dr.17767.2.A1_at (Zebrafish Array)   Dr.17767.2.A1_x_at (Zebrafish Array)   XM_001339844_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000146797
Ensembl peptide - ENSDARP00000113067
NCBI entrez gene - 799538     See in Manteia.
RefSeq - XM_001339844
RefSeq - XM_009295614
swissprot - E9QH84
ZFIN ID - ZDB-GENE-031112-9
Ensembl - ENSDARG00000079257
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GEMIN5ENSGALG00000003937Gallus gallus
 GEMIN5ENSG00000082516Homo sapiens
 Gemin5ENSMUSG00000037275Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030217 T cell differentiation IMP


Pathways (from Reactome)
Pathway description
snRNP Assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure increased amount , abnormal
Show

 ZFA:0001078 thymus thymus decreased amount , abnormal
thymus T cell absent , abnormal
thymus lymphoid progenitor cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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