ENSMUSG00000037275


Mus musculus

Features
Gene ID: ENSMUSG00000037275
  
Biological name :Gemin5
  
Synonyms : Gem-associated protein 5 / Gemin5 / Q8BX17
  
Possible biological names infered from orthology : gem nuclear organelle associated protein 5 / Q8TEQ6
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B1.3
Gene start: 58120002
Gene end: 58168539
  
Corresponding Affymetrix probe sets: 10386125 (MoGene1.0st)   1436310_at (Mouse Genome 430 2.0 Array)   1436311_at (Mouse Genome 430 2.0 Array)   1455453_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000131842
Ensembl peptide - ENSMUSP00000036603
Ensembl peptide - ENSMUSP00000099772
Ensembl peptide - ENSMUSP00000116600
NCBI entrez gene - 216766     See in Manteia.
MGI - MGI:2449311
RefSeq - XM_017314446
RefSeq - NM_001166669
RefSeq - NM_001166670
RefSeq - NM_001166671
RefSeq - NM_172558
RefSeq - XM_006532852
RefSeq - XM_006532853
RefSeq - XM_017314445
RefSeq Peptide - NP_001160141
RefSeq Peptide - NP_001160143
RefSeq Peptide - NP_766146
RefSeq Peptide - NP_001160142
swissprot - A2AFQ9
swissprot - F7CKD6
swissprot - E9PUU4
swissprot - Q8BX17
Ensembl - ENSMUSG00000037275
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gemin5ENSDARG00000079257Danio rerio
 GEMIN5ENSGALG00000003937Gallus gallus
 GEMIN5ENSG00000082516Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 cellular_componentGO:0032797 SMN complex IEA
 cellular_componentGO:0034718 SMN-Gemin2 complex IEA
 cellular_componentGO:0034719 SMN-Sm protein complex IEA
 cellular_componentGO:0097504 Gemini of coiled bodies ISS
 molecular_functionGO:0000340 RNA 7-methylguanosine cap binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0017069 snRNA binding IEA
 molecular_functionGO:0030619 U1 snRNA binding IEA
 molecular_functionGO:0030621 U4 snRNA binding IEA
 molecular_functionGO:0030622 U4atac snRNA binding IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
snRNP Assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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