ENSGALG00000003937


Gallus gallus

Features
Gene ID: ENSGALG00000003937
  
Biological name :GEMIN5
  
Synonyms : GEMIN5 / gem nuclear organelle associated protein 5
  
Possible biological names infered from orthology : Gem-associated protein 5 / Q8BX17 / Q8TEQ6
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 12017387
Gene end: 12033276
  
Corresponding Affymetrix probe sets: Gga.5570.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006262
NCBI entrez gene - 416254     See in Manteia.
RefSeq - XM_015293911
swissprot - F1NYJ6
Ensembl - ENSGALG00000003937
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gemin5ENSDARG00000079257Danio rerio
 GEMIN5ENSG00000082516Homo sapiens
 Gemin5ENSMUSG00000037275Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly IEA
 biological_processGO:0006417 regulation of translation IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 cellular_componentGO:0032797 SMN complex IEA
 cellular_componentGO:0034718 SMN-Gemin2 complex IEA
 cellular_componentGO:0034719 SMN-Sm protein complex IEA
 molecular_functionGO:0000340 RNA 7-methylguanosine cap binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0017069 snRNA binding IEA
 molecular_functionGO:0030619 U1 snRNA binding IEA
 molecular_functionGO:0030621 U4 snRNA binding IEA
 molecular_functionGO:0030622 U4atac snRNA binding IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
snRNP Assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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