ENSG00000082516


Homo sapiens

Features
Gene ID: ENSG00000082516
  
Biological name :GEMIN5
  
Synonyms : GEMIN5 / gem nuclear organelle associated protein 5 / Q8TEQ6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q33.2
Gene start: 154887416
Gene end: 154938209
  
Corresponding Affymetrix probe sets: 225712_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000285873
NCBI entrez gene - 25929     See in Manteia.
OMIM - 607005
RefSeq - NM_015465
RefSeq - NM_001252156
RefSeq Peptide - NP_001239085
RefSeq Peptide - NP_056280
swissprot - Q8TEQ6
Ensembl - ENSG00000082516
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gemin5ENSDARG00000079257Danio rerio
 GEMIN5ENSGALG00000003937Gallus gallus
 Gemin5ENSMUSG00000037275Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly TAS
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006417 regulation of translation IMP
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0051170 import into nucleus TAS
 biological_processGO:0065003 protein-containing complex assembly TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IDA
 cellular_componentGO:0032797 SMN complex IDA
 cellular_componentGO:0034718 SMN-Gemin2 complex IDA
 cellular_componentGO:0034719 SMN-Sm protein complex IDA
 cellular_componentGO:0097504 Gemini of coiled bodies IEA
 molecular_functionGO:0000340 RNA 7-methylguanosine cap binding IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017069 snRNA binding IDA
 molecular_functionGO:0030619 U1 snRNA binding IDA
 molecular_functionGO:0030621 U4 snRNA binding IDA
 molecular_functionGO:0030622 U4atac snRNA binding IDA
 molecular_functionGO:0043022 ribosome binding IDA


Pathways (from Reactome)
Pathway description
snRNP Assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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