ENSDARG00000079329


Danio rerio

Features
Gene ID: ENSDARG00000079329
  
Biological name :cop1
  
Synonyms : cop1 / COP1, E3 ubiquitin ligase
  
Possible biological names infered from orthology : Q8NHY2 / Q9R1A8
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 35116627
Gene end: 35137217
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101197
NCBI entrez gene - 100037391     See in Manteia.
RefSeq - NM_001089542
RefSeq Peptide - NP_001083011
swissprot - B0UY40
ZFIN ID - ZDB-GENE-070410-134
Ensembl - ENSDARG00000079329
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COP1ENSGALG00000004500Gallus gallus
 COP1ENSG00000143207Homo sapiens
 Cop1ENSMUSG00000040782Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Autodegradation of the E3 ubiquitin ligase COP1
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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