ENSDARG00000079684


Danio rerio

Features
Gene ID: ENSDARG00000079684
  
Biological name :taf6l
  
Synonyms : taf6l / TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
  
Possible biological names infered from orthology : Q8R2K4 / Q9CY24 / Q9Y6J9 / TATA-box binding protein associated factor 6 like
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 17953589
Gene end: 17970923
  
Corresponding Affymetrix probe sets: Dr.1305.1.A1_at (Zebrafish Array)   Dr.1305.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000144144
Ensembl peptide - ENSDARP00000100182
NCBI entrez gene - 557363     See in Manteia.
RefSeq - NM_001199722
RefSeq Peptide - NP_001186651
swissprot - E7FEV1
ZFIN ID - ZDB-GENE-030131-6789
Ensembl - ENSDARG00000079684
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAF6LENSG00000162227Homo sapiens
 Taf6lENSMUSG00000003680Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
taf6 / TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor / Q62311* / P49848* / TATA-box binding protein associated factor 6* / Mus musculus TATA-box binding protein a...ENSDARG0000010299818


Protein motifs (from Interpro)
Interpro ID Name
 IPR004823  TATA box binding protein associated factor (TAF)
 IPR009072  Histone-fold
 IPR011442  TAF6, C-terminal HEAT repeat domain
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0051090 regulation of DNA-binding transcription factor activity IEA
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0046695 SLIK (SAGA-like) complex IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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