ENSG00000162227


Homo sapiens

Features
Gene ID: ENSG00000162227
  
Biological name :TAF6L
  
Synonyms : Q9Y6J9 / TAF6L / TATA-box binding protein associated factor 6 like
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q12.3
Gene start: 62771303
Gene end: 62787342
  
Corresponding Affymetrix probe sets: 213209_at (Human Genome U133 Plus 2.0 Array)   213210_at (Human Genome U133 Plus 2.0 Array)   213211_s_at (Human Genome U133 Plus 2.0 Array)   222053_at (Human Genome U133 Plus 2.0 Array)   230049_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000294168
Ensembl peptide - ENSP00000435443
Ensembl peptide - ENSP00000435116
Ensembl peptide - ENSP00000434662
NCBI entrez gene - 10629     See in Manteia.
OMIM - 602946
RefSeq - XM_005273714
RefSeq - NM_006473
RefSeq Peptide - NP_006464
swissprot - A0A024R5A7
swissprot - E9PLV8
swissprot - E9PP94
swissprot - Q9Y6J9
swissprot - E9PK90
Ensembl - ENSG00000162227
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf6lENSDARG00000079684Danio rerio
 Taf6lENSMUSG00000003680Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAF6 / P49848 / TATA-box binding protein associated factor 6ENSG0000010629020


Protein motifs (from Interpro)
Interpro ID Name
 IPR004823  TATA box binding protein associated factor (TAF)
 IPR009072  Histone-fold
 IPR011442  TAF6, C-terminal HEAT repeat domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006338 chromatin remodeling TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0043966 histone H3 acetylation IDA
 biological_processGO:0051090 regulation of DNA-binding transcription factor activity IEA
 cellular_componentGO:0000118 histone deacetylase complex TAS
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0030914 STAGA complex IDA
 cellular_componentGO:0046695 SLIK (SAGA-like) complex IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0004402 histone acetyltransferase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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