ENSDARG00000088145


Danio rerio

Features
Gene ID: ENSDARG00000088145
  
Biological name :atg4db
  
Synonyms : atg4db / autophagy related 4D, cysteine peptidase b
  
Possible biological names infered from orthology : ATG4D / autophagy related 4D cysteine peptidase / Cysteine protease ATG4D Cysteine protease ATG4D, mitochondrial / Q86TL0 / Q8BGV9
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 6692369
Gene end: 6719232
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127832
Ensembl peptide - ENSDARP00000141805
swissprot - A0A0R4IZJ9
swissprot - X1WC89
ZFIN ID - ZDB-GENE-131025-1
Ensembl - ENSDARG00000088145
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATG4DENSG00000130734Homo sapiens
 Atg4dENSMUSG00000002820Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atg4da / autophagy related 4D, cysteine peptidase a / ATG4D* / Q8BGV9* / Q86TL0* / autophagy related 4D cysteine peptidase* / Cysteine protease ATG4D Cysteine protease ATG4D, mitochondrial*ENSDARG0000004354848
atg4c / autophagy related 4C, cysteine peptidase / Q811C2* / Q96DT6* / Cysteine protease ATG4C *ENSDARG0000004437341
atg4b / Q6DG88 / autophagy related 4B, cysteine peptidase / Q9Y4P1*ENSDARG0000005210424
atg4a / autophagy related 4A, cysteine peptidase / Q8WYN0*ENSDARG0000001453124


Protein motifs (from Interpro)
Interpro ID Name
 IPR005078  Peptidase C54


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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