ENSDARG00000088959


Danio rerio

Features
Gene ID: ENSDARG00000088959
  
Biological name :pdxka
  
Synonyms : pdxka / pyridoxal (pyridoxine, vitamin B6) kinase a
  
Possible biological names infered from orthology : O00764 / PDXK / pyridoxal kinase / Q8K183
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 19623363
Gene end: 19653458
  
Corresponding Affymetrix probe sets: Dr.20794.1.A1_at (Zebrafish Array)   Dr.835.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113113
Ensembl peptide - ENSDARP00000122041
Ensembl peptide - ENSDARP00000120312
NCBI entrez gene - 791775     See in Manteia.
RefSeq - NM_001126449
RefSeq Peptide - NP_001119921
swissprot - B0S7H2
swissprot - B0S7H1
swissprot - B0S7H0
ZFIN ID - ZDB-GENE-030131-8376
Ensembl - ENSDARG00000088959
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDXKENSGALG00000016205Gallus gallus
 PDXKENSG00000160209Homo sapiens
 PdxkENSMUSG00000032788Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pdxkb / pyridoxal (pyridoxine, vitamin B6) kinase b / PDXK* / O00764* / Q8K183* / pyridoxal kinase*ENSDARG0000003654679


Protein motifs (from Interpro)
Interpro ID Name
 IPR004625  Pyridoxine kinase
 IPR013749  Pyridoxamine kinase/Phosphomethylpyrimidine kinase
 IPR029056  Ribokinase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009443 pyridoxal 5"-phosphate salvage IEA
 biological_processGO:0016310 phosphorylation IEA
 molecular_functionGO:0008478 pyridoxal kinase activity IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Vitamins B6 activation to pyridoxal phosphate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000088959 pdxka / pyridoxal (pyridoxine, vitamin B6) kinase a / PDXK* / O00764* / Q8K183* / pyridoxal kinase*  / complex
 ENSDARG00000036546 pdxkb / pyridoxal (pyridoxine, vitamin B6) kinase b / PDXK* / O00764* / Q8K183* / pyridoxal kinase*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr