ENSDARG00000090387


Danio rerio

Features
Gene ID: ENSDARG00000090387
  
Biological name :onecut2
  
Synonyms : onecut2 / one cut homeobox 2
  
Possible biological names infered from orthology : O95948 / One cut domain family member 2 / Q6XBJ3
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 1698232
Gene end: 1742159
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000126061
swissprot - I3IT10
ZFIN ID - ZDB-GENE-120215-73
Ensembl - ENSDARG00000090387
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ONECUT2ENSGALG00000035751Gallus gallus
 O95948ENSG00000119547Homo sapiens
 Q6XBJ3ENSMUSG00000045991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
onecut1 / one cut homeobox 1ENSDARG0000000798265
onecut3b / one cut homeobox 3b / O60422* / ONECUT3* / one cut homeobox 3*ENSDARG0000009105965
onecut3a / one cut homeobox 3a / Q8K557* / O60422* / ONECUT3* / one cut homeobox 3* / One cut domain family member 3 *ENSDARG0000005639565
onecutl / one cut domain, family member, likeENSDARG0000004025345
cux1a / cut-like homeobox 1aENSDARG0000007845923
cux2b / cut-like homeobox 2b / CUX2* / P70298* / O14529* / cut like homeobox 2* / Homeobox protein cut-like 2 *ENSDARG0000008634520
cux1b / cut-like homeobox 1bENSDARG000000431347


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003350  CUT domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048731 system development IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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