ENSDARG00000090512


Danio rerio

Features
Gene ID: ENSDARG00000090512
  
Biological name :trim8a
  
Synonyms : trim8a / tripartite motif containing 8a
  
Possible biological names infered from orthology : Probable E3 ubiquitin-protein ligase TRIM8 / Q99PJ2 / Q9BZR9 / TRIM8 / tripartite motif containing 8
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 11876145
Gene end: 11929531
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000157608
Ensembl peptide - ENSDARP00000110194
NCBI entrez gene - 101180910     See in Manteia.
RefSeq - NM_001278854
RefSeq Peptide - NP_001265783
swissprot - E7FCI6
ZFIN ID - ZDB-GENE-130107-1
Ensembl - ENSDARG00000090512
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM8ENSGALG00000036785Gallus gallus
 TRIM8ENSG00000171206Homo sapiens
 Trim8ENSMUSG00000025034Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim8b / tripartite motif containing 8b / TRIM8* / Q9BZR9* / Q99PJ2* / tripartite motif containing 8* / Probable E3 ubiquitin-protein ligase TRIM8 *ENSDARG0000006072969
ftr73 / finTRIM family, member 73ENSDARG0000009529816
ftr87 / finTRIM family, member 87ENSDARG0000010255715
zgc:92594ENSDARG0000008951714
ftr69 / finTRIM family, member 69ENSDARG0000005264612
trim110 / tripartite motif containing 110ENSDARG0000006824010


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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