ENSDARG00000090778


Danio rerio

Features
Gene ID: ENSDARG00000090778
  
Biological name :ttll1
  
Synonyms : ttll1 / tubulin tyrosine ligase-like family, member 1
  
Possible biological names infered from orthology : O95922 / Q91V51 / tubulin tyrosine ligase like 1
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 77919987
Gene end: 77932570
  
Corresponding Affymetrix probe sets: Dr.26460.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124463
Ensembl peptide - ENSDARP00000108511
Ensembl peptide - ENSDARP00000123901
NCBI entrez gene - 393994     See in Manteia.
swissprot - F8W385
swissprot - Q7T3B3
ZFIN ID - ZDB-GENE-040426-1326
Ensembl - ENSDARG00000090778
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTLL1ENSGALG00000014163Gallus gallus
 TTLL1ENSG00000100271Homo sapiens
 Ttll1ENSMUSG00000022442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ttll9 / tubulin tyrosine ligase-like family, member 9 / A2APC3* / Q3SXZ7* / tubulin tyrosine ligase like 9*ENSDARG0000006280640
ttll5 / tubulin tyrosine ligase-like family, member 5 / Q6EMB2* / tubulin tyrosine ligase like 5*ENSDARG0000003679330
ttll6 / tubulin tyrosine ligase-like family, member 6 / A4Q9E8* / Q8N841* / tubulin tyrosine ligase like 6*ENSDARG0000005402328
ttll2 / tubulin tyrosine ligase-like family, member 2 / Q9BWV7* / tubulin tyrosine ligase like 2*ENSDARG0000007785326
ttll4 / tubulin tyrosine ligase-like family, member 4 / Q14679* / Q80UG8* / tubulin tyrosine ligase like 4*ENSDARG0000007893526
ttll11 / tubulin tyrosine ligase-like family, member 11 / A4Q9F4* / Q8NHH1* / tubulin tyrosine ligase like 11*ENSDARG0000006037424
ttll7 / tubulin tyrosine ligase-like family, member 7 / Q6ZT98* / tubulin tyrosine ligase like 7*ENSDARG0000006297322
ttll3 / tubulin tyrosine ligase-like family, member 3 / Q9Y4R7* / A4Q9E5* / ARPC4-TTLL3* / ARPC4-TTLL3 readthrough* / tubulin tyrosine ligase like 3*ENSDARG0000005372822
ttll10 / tubulin tyrosine ligase-like family, member 10 / Q6ZVT0* / tubulin tyrosine ligase like 10*ENSDARG0000009047220


Protein motifs (from Interpro)
Interpro ID Name
 IPR004344  Tubulin-tyrosine ligase/Tubulin polyglutamylase
 IPR013815  ATP-grasp fold, subdomain 1
 IPR027750  Tubulin polyglutamylase TTLL1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process IEA
 biological_processGO:0018095 protein polyglutamylation IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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