ENSDARG00000091851


Danio rerio

Features
Gene ID: ENSDARG00000091851
  
Biological name :tsen2
  
Synonyms : tsen2 / TSEN2 tRNA splicing endonuclease subunit
  
Possible biological names infered from orthology : Q6P7W5 / Q8NCE0 / tRNA splicing endonuclease subunit 2 / tRNA-splicing endonuclease subunit Sen2
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 588017
Gene end: 596505
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000095278
swissprot - F1QLQ4
ZFIN ID - ZDB-GENE-060929-918
Ensembl - ENSDARG00000091851
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSEN2ENSGALG00000004981Gallus gallus
 TSEN2ENSG00000154743Homo sapiens
 Tsen2ENSMUSG00000042389Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006676  tRNA-splicing endonuclease
 IPR006677  tRNA intron endonuclease, catalytic domain-like
 IPR006678  tRNA intron endonuclease, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000379 tRNA-type intron splice site recognition and cleavage IBA
 biological_processGO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0000214 tRNA-intron endonuclease complex IBA
 molecular_functionGO:0000213 tRNA-intron endonuclease activity IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004518 nuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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