ENSDARG00000095826


Danio rerio

Features
Gene ID: ENSDARG00000095826
  
Biological name :smdt1a
  
Synonyms : single-pass membrane protein with aspartate-rich tail 1a / smdt1a
  
Possible biological names infered from orthology : Q9DB10 / Q9H4I9 / single-pass membrane protein with aspartate rich tail 1 / SMDT1
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 1186540
Gene end: 1190132
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124644
Ensembl peptide - ENSDARP00000152179
swissprot - F8W2Q5
ZFIN ID - ZDB-GENE-110411-114
Ensembl - ENSDARG00000095826
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SMDT1ENSGALG00000011897Gallus gallus
 SMDT1ENSG00000183172Homo sapiens
 Smdt1ENSMUSG00000022452Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smdt1b / single-pass membrane protein with aspartate-rich tail 1b / SMDT1* / Q9DB10* / Q9H4I9* / single-pass membrane protein with aspartate rich tail 1*ENSDARG0000009885240


Protein motifs (from Interpro)
Interpro ID Name
 IPR018782  Essential MCU regulator, mitochondrial


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0036444 calcium import into the mitochondrion IEA
 biological_processGO:0051560 mitochondrial calcium ion homeostasis IEA
 cellular_componentGO:1990246 uniplex complex IEA


Pathways (from Reactome)
Pathway description
Mitochondrial calcium ion transport
Processing of SMDT1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr