ENSDARG00000095925


Danio rerio

Features
Gene ID: ENSDARG00000095925
  
Biological name :si:dkey-258f14.7
  
Synonyms : si:dkey-258f14.7
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 13722656
Gene end: 13735572
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115258
swissprot - F1Q8F3
ZFIN ID - ZDB-GENE-081104-398
Ensembl - ENSDARG00000095925
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-258f14.3ENSDARG00000075974100
nid2b / nidogen 2b (osteonidogen) / NID2* / Q14112* / O88322* / nidogen 2*ENSDARG0000000947126
egf / epidermal growth factor / P01132* / P01133* / Mus musculus epidermal growth factor (Egf), transcript variant 3, mRNA.*ENSDARG0000005273925
nid1b / nidogen 1b / NID1* / P14543* / P10493* / nidogen 1*ENSDARG0000010312922
nid2a / nidogen 2a (osteonidogen) / NID2* / Q14112* / O88322* / nidogen 2*ENSDARG0000007570722
nid1a / nidogen 1a / NID1* / P14543* / P10493* / nidogen 1*ENSDARG0000006871022


Protein motifs (from Interpro)
Interpro ID Name
 IPR000033  LDLR class B repeat
 IPR011042  Six-bladed beta-propeller, TolB-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 molecular_functionGO:0030229 very-low-density lipoprotein particle receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr