ENSDARG00000075707


Danio rerio

Features
Gene ID: ENSDARG00000075707
  
Biological name :nid2a
  
Synonyms : nid2a / nidogen 2a (osteonidogen)
  
Possible biological names infered from orthology : NID2 / nidogen 2 / O88322 / Q14112
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 14796926
Gene end: 14876758
  
Corresponding Affymetrix probe sets: Dr.17882.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129416
Ensembl peptide - ENSDARP00000128397
Ensembl peptide - ENSDARP00000128493
Ensembl peptide - ENSDARP00000129110
Ensembl peptide - ENSDARP00000129293
Ensembl peptide - ENSDARP00000127795
Ensembl peptide - ENSDARP00000127516
NCBI entrez gene - 322921     See in Manteia.
RefSeq - XM_017351774
RefSeq - XM_005169850
swissprot - X1WC52
swissprot - X1WBC5
swissprot - X1WDU8
swissprot - X1WE42
swissprot - X1WFV5
swissprot - X1WGD8
swissprot - X1WGQ8
ZFIN ID - ZDB-GENE-030827-2
Ensembl - ENSDARG00000075707
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NID2ENSGALG00000012394Gallus gallus
 NID2ENSG00000087303Homo sapiens
 Nid2ENSMUSG00000021806Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nid2b / nidogen 2b (osteonidogen) / NID2* / Q14112* / O88322* / nidogen 2*ENSDARG0000000947137
nid1b / nidogen 1b / NID1* / P14543* / P10493* / nidogen 1*ENSDARG0000010312929
nid1a / nidogen 1a / NID1* / P14543* / P10493* / nidogen 1*ENSDARG0000006871028
egf / epidermal growth factor / P01132* / P01133* / Mus musculus epidermal growth factor (Egf), transcript variant 3, mRNA.*ENSDARG0000005273910
si:dkey-258f14.3ENSDARG000000759747
si:dkey-258f14.7ENSDARG000000959253


Protein motifs (from Interpro)
Interpro ID Name
 IPR000033  LDLR class B repeat
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000716  Thyroglobulin type-1
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR003886  NIDO domain
 IPR006605  G2 nidogen/fibulin G2F
 IPR009017  Green fluorescent protein
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR024731  EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Laminin interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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