ENSGALG00000012394


Gallus gallus

Features
Gene ID: ENSGALG00000012394
  
Biological name :NID2
  
Synonyms : NID2 / nidogen 2
  
Possible biological names infered from orthology : O88322 / Q14112
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 58232297
Gene end: 58243505
  
Corresponding Affymetrix probe sets: GgaAffx.7851.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020214
NCBI entrez gene - 423583     See in Manteia.
RefSeq - XM_015276768
RefSeq - XM_015276769
RefSeq - XM_015276770
swissprot - F1NDL4
Ensembl - ENSGALG00000012394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nid2aENSDARG00000075707Danio rerio
 nid2bENSDARG00000009471Danio rerio
 NID2ENSG00000087303Homo sapiens
 Nid2ENSMUSG00000021806Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NID1 / nidogen 1 / P10493* / P14543*ENSGALG0000004207939
EGF / pro-epidermal growth factor precursor / P01132* / P01133* / epidermal growth factor* / Mus musculus epidermal growth factor (Egf), transcript variant 3, mRNA.*ENSGALG0000001215513


Protein motifs (from Interpro)
Interpro ID Name
 IPR000033  LDLR class B repeat
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000716  Thyroglobulin type-1
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR003886  NIDO domain
 IPR006605  G2 nidogen/fibulin G2F
 IPR009017  Green fluorescent protein
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR024731  EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Laminin interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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