ENSDARG00000095969


Danio rerio

Features
Gene ID: ENSDARG00000095969
  
Biological name :si:ch73-106g13.1
  
Synonyms : si:ch73-106g13.1
  
Possible biological names infered from orthology : CORO2A / coronin 2A / Q8C0P5 / Q92828
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 44157682
Gene end: 44180795
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130468
Ensembl peptide - ENSDARP00000124280
NCBI entrez gene - 555277     See in Manteia.
RefSeq - XM_017353674
swissprot - F8W415
swissprot - A0A0R4I9S4
ZFIN ID - ZDB-GENE-110408-58
Ensembl - ENSDARG00000095969
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CORO2AENSGALG00000001933Gallus gallus
 CORO2AENSG00000106789Homo sapiens
 Coro2aENSMUSG00000028337Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
coro2a / coronin, actin binding protein, 2A / Q8C0P5* / Q92828* / coronin 2A*ENSDARG0000000521054
coro2bb / coronin, actin binding protein, 2BbENSDARG0000006360449
coro2ba / coronin, actin binding protein, 2Ba / CORO2B* / Q8BH44* / Q9UQ03* / coronin 2B*ENSDARG0000007944049
coro1b / coronin, actin binding protein, 1B / Q9BR76* / Q9WUM3* / coronin 1B*ENSDARG0000000866037
coro1a / coronin, actin binding protein, 1A / O89053* / P31146* / coronin 1A*ENSDARG0000005461036
coro1ca / coronin, actin binding protein, 1Ca / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000003559836
coro1cb / coronin, actin binding protein, 1Cb / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000002119335
coro6 / coronin 6 / Q6QEF8* / Q920M5*ENSDARG0000010227232
coro7 / coronin 7 / P57737* / Q9D2V7* / CORO7-PAM16* / CORO7-PAM16 readthrough*ENSDARG0000008961627


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015048  Domain of unknown function DUF1899
 IPR015505  Coronin
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR027335  Coronin 2A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030036 actin cytoskeleton organization IBA
 cellular_componentGO:0015629 actin cytoskeleton IBA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr