ENSDARG00000102272


Danio rerio

Features
Gene ID: ENSDARG00000102272
  
Biological name :coro6
  
Synonyms : coro6 / coronin 6
  
Possible biological names infered from orthology : Q6QEF8 / Q920M5
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 40484088
Gene end: 40529184
  
Corresponding Affymetrix probe sets: Dr.12674.2.A1_at (Zebrafish Array)   NM_200396_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000132171
Ensembl peptide - ENSDARP00000130643
NCBI entrez gene - 393367     See in Manteia.
RefSeq - NM_200396
RefSeq Peptide - NP_956690
swissprot - A0A0R4IDN0
swissprot - Q7SZ58
ZFIN ID - ZDB-GENE-040426-1202
Ensembl - ENSDARG00000102272
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CORO6ENSGALG00000028949Gallus gallus
 CORO6ENSG00000167549Homo sapiens
 Coro6ENSMUSG00000020836Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
coro1cb / coronin, actin binding protein, 1Cb / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000002119371
coro1ca / coronin, actin binding protein, 1Ca / CORO1C* / Q9ULV4* / Q9WUM4* / coronin 1C*ENSDARG0000003559868
coro1a / coronin, actin binding protein, 1A / O89053* / P31146* / coronin 1A*ENSDARG0000005461061
coro1b / coronin, actin binding protein, 1B / Q9BR76* / Q9WUM3* / coronin 1B*ENSDARG0000000866061
coro2bb / coronin, actin binding protein, 2BbENSDARG0000006360443
coro2ba / coronin, actin binding protein, 2Ba / CORO2B* / Q8BH44* / Q9UQ03* / coronin 2B*ENSDARG0000007944042
coro2a / coronin, actin binding protein, 2A / Q8C0P5* / Q92828* / coronin 2A*ENSDARG0000000521042
si:ch73-106g13.1 / CORO2A* / Q8C0P5* / Q92828* / coronin 2A*ENSDARG0000009596936
coro7 / coronin 7 / P57737* / Q9D2V7* / CORO7-PAM16* / CORO7-PAM16 readthrough*ENSDARG0000008961631


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR015048  Domain of unknown function DUF1899
 IPR015505  Coronin
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR027337  Coronin 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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