ENSDARG00000096787


Danio rerio

Features
Gene ID: ENSDARG00000096787
  
Biological name :selp
  
Synonyms : selectin P / selp
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 33962828
Gene end: 33966148
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119013
swissprot - F1R979
ZFIN ID - ZDB-GENE-110107-2
Ensembl - ENSDARG00000096787
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
selp / selectin P / SELL* / Q01102* / P16109* / P18337* / P14151* / selectin L* / selectin, platelet* / selectin, lymphocyte*ENSDARG0000004213836
sele / selectin E / P16581* / selectin, endothelial cell*ENSDARG0000000912336
si:ch73-217n20.1ENSDARG0000009158413
cfh / complement factor HENSDARG0000010044213
cfhl1 / complement factor H like 1ENSDARG0000010521212
rca2.1 / regulator of complement activation group 2 gene 1 / CD46* / C4bp* / CD55* / Zp3r* / C4BPA* / Cd55b* / P08607* / P15529* / Q61475* / O88174* / P04003* / P08174* / CD46 molecule* / C...ENSDARG0000005607511
rca2.2 / regulator of complement activation group 2 gene 2 / CD46* / C4bp* / CD55* / Zp3r* / C4BPA* / Cd55b* / P08607* / P15529* / Q61475* / O88174* / P04003* / P08174* / CD46 molecule* / C...ENSDARG0000009551210
cfhl3 / complement factor H like 3ENSDARG0000010420510
ntd5 / ntl-dependent gene 5ENSDARG000000409449
cfhl4 / complement factor H like 4ENSDARG000001024568
cfhl2 / complement factor H like 2ENSDARG000001037608
cfhl5 / complement factor H like 5ENSDARG000001050523
f13b / coagulation factor XIII, B polypeptideENSDARG000001013532


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR002396  Selectin superfamily
 IPR013032  EGF-like, conserved site
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR033991  Selectin, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0030097 hemopoiesis IMP
 biological_processGO:0035701 hematopoietic stem cell migration IMP
 biological_processGO:0097241 hematopoietic stem cell migration to bone marrow IMP
 cellular_componentGO:0016020 membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000033 intermediate cell mass of mesoderm intermediate cell mass of mesoderm hematopoietic stem cell decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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