ENSDARG00000056075


Danio rerio

Features
Gene ID: ENSDARG00000056075
  
Biological name :rca2.1
  
Synonyms : rca2.1 / regulator of complement activation group 2 gene 1
  
Possible biological names infered from orthology : C4b-binding protein / C4bp / C4BPA / CD46 / CD46 molecule / CD55 / Cd55b / CD55 molecule (Cromer blood group) / complement component 4 binding protein alpha / Complement decay-accelerating factor, GPI-anchored / Membrane cofactor protein / O88174 / P04003 / P08174 / P08607 / P15529 / Q61475 / zona pellucida 3 receptor / Zp3r
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 26094481
Gene end: 26120281
  
Corresponding Affymetrix probe sets: Dr.12892.1.A1_at (Zebrafish Array)   Dr.12892.2.A1_at (Zebrafish Array)   NM_001013494_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094648
Ensembl peptide - ENSDARP00000134408
Ensembl peptide - ENSDARP00000116148
NCBI entrez gene - 541367     See in Manteia.
RefSeq - NM_001013494
RefSeq - XM_005162169
RefSeq Peptide - NP_001013512
swissprot - Q5BLG1
swissprot - A2AR65
swissprot - A2AR64
swissprot - A0A0R4IJE2
ZFIN ID - ZDB-GENE-050320-60
Ensembl - ENSDARG00000056075
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C4BPAENSGALG00000001175Gallus gallus
 C4BPAENSG00000123838Homo sapiens
 CD46ENSG00000117335Homo sapiens
 CD55ENSG00000196352Homo sapiens
 C4bpENSMUSG00000026405Mus musculus
 Cd46ENSMUSG00000016493Mus musculus
 Cd55ENSMUSG00000026399Mus musculus
 Cd55bENSMUSG00000026401Mus musculus
 Zp3rENSMUSG00000042554Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rca2.2 / regulator of complement activation group 2 gene 2 / CD46* / C4bp* / CD55* / Zp3r* / C4BPA* / Cd55b* / P08607* / P15529* / Q61475* / O88174* / P04003* / P08174* / CD46 molecule* / C...ENSDARG0000009551258
si:ch73-217n20.1ENSDARG0000009158423
selp / selectin P / SELL* / Q01102* / P16109* / P18337* / P14151* / selectin L* / selectin, platelet* / selectin, lymphocyte*ENSDARG0000004213817
cfhl1 / complement factor H like 1ENSDARG0000010521217
sele / selectin E / P16581* / selectin, endothelial cell*ENSDARG0000000912316
cfh / complement factor HENSDARG0000010044216
ntd5 / ntl-dependent gene 5ENSDARG0000004094416
cfhl2 / complement factor H like 2ENSDARG0000010376013
cfhl3 / complement factor H like 3ENSDARG0000010420510
selp / selectin PENSDARG000000967878
cfhl4 / complement factor H like 4ENSDARG000001024567
cfhl5 / complement factor H like 5ENSDARG000001050524
f13b / coagulation factor XIII, B polypeptideENSDARG000001013534


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Class B/2 (Secretin family receptors)
Neutrophil degranulation
COPI-mediated anterograde transport
Regulation of Complement cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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