ENSDARG00000009123


Danio rerio

Features
Gene ID: ENSDARG00000009123
  
Biological name :sele
  
Synonyms : sele / selectin E
  
Possible biological names infered from orthology : P16581 / selectin, endothelial cell
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 33969430
Gene end: 33976937
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101781
Ensembl peptide - ENSDARP00000114330
swissprot - F1QIT5
swissprot - F1QTG4
ZFIN ID - ZDB-GENE-041014-221
Ensembl - ENSDARG00000009123
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SELEENSGALG00000031430Gallus gallus
 SELEENSG00000007908Homo sapiens
 SeleENSMUSG00000026582Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
selp / selectin P / SELL* / Q01102* / P16109* / P18337* / P14151* / selectin L* / selectin, platelet* / selectin, lymphocyte*ENSDARG0000004213830
cfh / complement factor HENSDARG0000010044213
selp / selectin PENSDARG0000009678712
cfhl1 / complement factor H like 1ENSDARG0000010521211
cfhl2 / complement factor H like 2ENSDARG0000010376010
rca2.1 / regulator of complement activation group 2 gene 1 / CD46* / C4bp* / CD55* / Zp3r* / C4BPA* / Cd55b* / P08607* / P15529* / Q61475* / O88174* / P04003* / P08174* / CD46 molecule* / C...ENSDARG000000560758
cfhl3 / complement factor H like 3ENSDARG000001042058
rca2.2 / regulator of complement activation group 2 gene 2 / CD46* / C4bp* / CD55* / Zp3r* / C4BPA* / Cd55b* / P08607* / P15529* / Q61475* / O88174* / P04003* / P08174* / CD46 molecule* / C...ENSDARG000000955127
si:ch73-217n20.1ENSDARG000000915846
cfhl4 / complement factor H like 4ENSDARG000001024566
ntd5 / ntl-dependent gene 5ENSDARG000000409445
cfhl5 / complement factor H like 5ENSDARG000001050524
f13b / coagulation factor XIII, B polypeptideENSDARG000001013533


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR002396  Selectin superfamily
 IPR013032  EGF-like, conserved site
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR033991  Selectin, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Cell surface interactions at the vascular wall


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000105023 selplg / selectin P ligand / Q14242*  / complex / reaction
 ENSDARG00000087863 cd44a / CD44 molecule (Indian blood group) a / CD44* / P16070* / CD44 molecule (Indian blood group)*  / reaction / complex
 ENSDARG00000089892 cd44b / CD44 molecule (Indian blood group) b / CD44* / P16070* / CD44 molecule (Indian blood group)*  / reaction / complex






 

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